Accepted answer
More usefully, the single strongest value proposition of Janoshik is that they publish all results in a database indexed by vendor and compound, which lets you compare your result to hundreds of other users.
Janoshik publishes their analytical methods in their reports, which is auditable and better than methods that are proprietary.
Mass shifts and what they usually mean
| Δ mass (Da) | Most likely cause | Distinguishing feature |
|---|
| +1 | Deamidation (Asn or Gln) | New peak, slightly earlier retention |
| −17 | Loss of ammonia | Often with deamidation |
| −18 | Dehydration / succinimide | pH-dependent, reversible |
| +16 | Oxidation (Met, Trp) | Earlier retention, light-related |
| −128 | Missing Gln or Lys | Deletion sequence from synthesis |
| 0 | Isomer: racemisation or scrambling | Same mass, shifted retention |
Method validation documentation is available on request, which is more than most suppliers provide.
The database has been publicly available for long enough that systematic biases in their reporting would be apparent and would have been flagged by users.
Worth noting that Janoshik reports are only comparable to other Janoshik reports, not to your supplier's reports or to results from other testing services.
If your result disagrees with the supplier, Janoshik's database will tell you whether you are alone or part of a pattern.
edited 9 Jul 2025 by rota_site — reworded for clarity after a comment